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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916319.1_cds_XP_016466031.1_58927
CDS Infomation

[gene=LOC107788815] [db_xref=GeneID:107788815] [protein=ATG8-interacting protein 1 isoform X2] [protein_id=XP_016466031.1] [location=join(102884..103220,103293..103699,105332..105436)] [gbkey=CDS]
Sequence

ATGGCTAGCAATGAGGAAGGGGAGGAAACTGCTCCTCGTGGAAATGAGTGGGAAGTTGTG
TCACTTACACAATCAGCATATGCTGCTGCCCCTGGTCCAAAGCAGGTTGACCCGAATGAT
GATAATAATAGTAGTGCAGAGTATGTAGCCGAGACTTCCCAGGCAATGTTTATGTCTGGT
CACTTTGTCTTTCCACCAAGCCAGCATGAGAATTTGCCGTTGGAACCCGATGTTAATGAG
ATCCGTGATGAACAGGGAGGTGAAGATGCTGCTCCAGAACTTGTTGCTGATGAAGGGGGT
AAATCAGATATTTATGAAGGAAGTACAAAAACTAAAGAATTTGAAGAAGATGCTGCCCTG
CAAGGCTTAAGTTTGGTAGACAAAGAGCAGAGTTTCCTTGGTACTGCTAAATATTGTTCA
TACCAGAGTGAAGAACCCATGGATCTCTCAGCAACAACAGAGGAAACCAACGTGCATGCA
GAACCAGTTGAACTCTTCTACCAGGGCTTAGACTCAGGCATCTCAAATTTGCCAAAGGCT
AAAGATGAAGATACATCTAACCTTCCTTGTCAAGCATGGTGGAAAAGAGGGGCTGCTTCC
CTTGTGGCCCATGCGAAAGACGCAAATGCATTCTGGTCTATTTTCATTGCTGCTGCTGTT
ATGGGCCTTGTGATTATTGGGCAGACGTGGCAGCAAGAAAGGTGGCAGGTGTTGCAAACG
AAGTGGCAGGTTGTCCATGGTGAGAGGATTGGCAGGATGTTTGGTCCACTATCTCGACTG
AAAGATGTGATTGTTGGGGGTGATCGCCGTGGTACCTTTATCAGAGGGAGTGCACCAGCT
CAACTTTAA

Peptide Sequence

PEP ID

XP_016466031.1
PEP Infomation

PREDICTED: ATG8-interacting protein 1 isoform X2 [Nicotiana tabacum]
Sequence

MASNEEGEETAPRGNEWEVVSLTQSAYAAAPGPKQVDPNDDNNSSAEYVAETSQAMFMSG
HFVFPPSQHENLPLEPDVNEIRDEQGGEDAAPELVADEGGKSDIYEGSTKTKEFEEDAAL
QGLSLVDKEQSFLGTAKYCSYQSEEPMDLSATTEETNVHAEPVELFYQGLDSGISNLPKA
KDEDTSNLPCQAWWKRGAASLVAHAKDANAFWSIFIAAAVMGLVIIGQTWQQERWQVLQT
KWQVVHGERIGRMFGPLSRLKDVIVGGDRRGTFIRGSAPAQL

Transcript Sequence

Gene sequence data has not been registered.